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philcarmona 2020-04-03 22:33:20 +02:00 committed by GitHub
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commit ec6a79cd17
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1 changed files with 7 additions and 6 deletions
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ucovid.py
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@ -16,7 +16,7 @@ font = {'family' : 'normal',
'size' : 22} 'size' : 22}
plt.rc('font', **font) plt.rc('font', **font)
#plt.rc('text', usetex=True) #plt.rc('text', usetex=True) #rend plus rapide les sorties graphiques
plt.rc('xtick',labelsize=22) plt.rc('xtick',labelsize=22)
plt.rc('ytick',labelsize=22) plt.rc('ytick',labelsize=22)
@ -114,8 +114,8 @@ np.log(spectralrad(phiT)),p*spectralabc(b(1))+(1-p)*spectralabc(b(5))
sns.set(style="whitegrid") sns.set(style="whitegrid")
def ualon(cbeta,rzero=2.5): def ualon(cbeta,rzero=2.5):
return( (1-rzero*(1-cbeta))/(rzero*cbeta)) return( (1-rzero*(1-cbeta))/(rzero*cbeta))
rzero=2.5 #rzero=2.5
utt=np.linspace(1-1/rzero,1,100) #utt=np.linspace(1-1/rzero,1,100)
#plt.xlabel(r"$c_\beta$ : efficiency of social distancing") #plt.xlabel(r"$c_\beta$ : efficiency of social distancing")
#plt.ylabel("p : proportion of freedom (no social distancing)") #plt.ylabel("p : proportion of freedom (no social distancing)")
#plt.plot(utt,[ualon(i,rzero) for i in utt]) #plt.plot(utt,[ualon(i,rzero) for i in utt])
@ -245,7 +245,8 @@ spectralabc(A)-np.log(spectralrad(expm(A)))#la cela coincide
def bipersiraicov(betaA=0.25, def bipersiraicov(betaA=0.25,
betaS=0.25, betaS=0.25,
piS=0.15,gammaA=0.1,gammaS=0.05,T1=7,T2=100,nbpts=50): piS=0.15,gammaA=0.1,gammaS=0.05,T1=7,T2=100,nbpts=50):
#modif du 3 avril : il faut calculer le rzero pour ualon
rzero=(piS*betaS/gammaS)+ ((1-piS)*betaA/gammaA)
ctt=np.linspace(0,1,nbpts) ctt=np.linspace(0,1,nbpts)
l=[[],[]] l=[[],[]]
for i, T in enumerate((T1,T2)): for i, T in enumerate((T1,T2)):
@ -260,12 +261,12 @@ def bipersiraicov(betaA=0.25,
p=brentq(lrsp,0,1) p=brentq(lrsp,0,1)
l[i].append([cbeta,p]) l[i].append([cbeta,p])
l=np.array(l) l=np.array(l)
utt=np.linspace(1-1/rzero,1,20)#pour ualon
f,ax=plt.subplots(1,1) f,ax=plt.subplots(1,1)
axc=ax axc=ax
axc.set_xlabel(r"$c_\beta$ : efficiency of social distancing") axc.set_xlabel(r"$c_\beta$ : efficiency of social distancing")
axc.set_ylabel("p : proportion of freedom (no social distancing)") axc.set_ylabel("p : proportion of freedom (no social distancing)")
axc.plot(utt,[ualon(i,rzero) for i in utt],label="U Alon") axc.plot(utt,[ualon(i,rzero) for i in utt],'bo',label="U Alon")
axc.plot(l[0][:,0],l[0][:,1],label="T="+str(T1)) axc.plot(l[0][:,0],l[0][:,1],label="T="+str(T1))
axc.plot(l[1][:,0],l[1][:,1],label="T="+str(T2)) axc.plot(l[1][:,0],l[1][:,1],label="T="+str(T2))
axc.legend(loc='upper left') axc.legend(loc='upper left')