From 1bf1d37934339603ac2952459f9a404375f4db6e Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Wed, 27 Mar 2019 06:36:51 -0400
Subject: [PATCH 01/32] add scipy

---
 environment.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/environment.yml b/environment.yml
index ff91ebb..c9545ce 100644
--- a/environment.yml
+++ b/environment.yml
@@ -11,3 +11,4 @@ dependencies:
   - partd
   - bokeh
   - dask
+  - scipy

From 53cf1e86a2f7d654cc88875e64192d27b34a3be7 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Wed, 27 Mar 2019 12:39:34 -0400
Subject: [PATCH 02/32] test

---
 environment.yml | 22 +++++++++++++++++++++-
 1 file changed, 21 insertions(+), 1 deletion(-)

diff --git a/environment.yml b/environment.yml
index c9545ce..cfd929a 100644
--- a/environment.yml
+++ b/environment.yml
@@ -1,4 +1,4 @@
-name: example-environment
+name: base-environment
 channels:
   - conda-forge
 dependencies:
@@ -12,3 +12,23 @@ dependencies:
   - bokeh
   - dask
   - scipy
+  - zstd
+  - zlib
+  - zict
+  - zeromq
+  - yaml
+  - xz
+  - xlwt
+  - xlwings
+  - wheel
+  - tornado
+  - sqlite
+  - sympy
+  - sip
+  - tk
+  - isort
+  - ipytkernel
+  - ipython
+  - html5lib
+  - jupyter
+  - libssh2

From f05dc6361eb821b7e7187f030df346714b6054fe Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 13:21:27 -0400
Subject: [PATCH 03/32] button link fix

---
 README.md | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/README.md b/README.md
index b2cf02f..3ce742d 100644
--- a/README.md
+++ b/README.md
@@ -1,12 +1,12 @@
 # Conda environment with environment.yml
 
-[![Binder](http://mybinder.org/badge_logo.svg)](http://beta.mybinder.org/v2/gh/binder-examples/conda_environment/v1.0?filepath=index.ipynb)
+[![Binder](http://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/3keepmovingforward3/conda/test)
 
 A Binder-compatible repo with an `environment.yml` file.
 
 Access this Binder at the following URL:
 
-https://mybinder.org/v2/gh/3keepmovingforward3/conda/test
+
 
 ## Notes
 The `environment.yml` file should list all Python libraries on which your notebooks

From f6e59dd8508e55a1f4041c82fdf7ceab9d47f4f9 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 13:22:22 -0400
Subject: [PATCH 04/32] add octave_kernel

---
 environment.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/environment.yml b/environment.yml
index cfd929a..a2b45cf 100644
--- a/environment.yml
+++ b/environment.yml
@@ -32,3 +32,4 @@ dependencies:
   - html5lib
   - jupyter
   - libssh2
+  - octave_kernel

From 182c412c15cca4e334810c680061ed09dcc3b6ab Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 13:24:55 -0400
Subject: [PATCH 05/32] python 3.7

---
 environment.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/environment.yml b/environment.yml
index a2b45cf..fc5d710 100644
--- a/environment.yml
+++ b/environment.yml
@@ -33,3 +33,4 @@ dependencies:
   - jupyter
   - libssh2
   - octave_kernel
+  - python=3.7

From 962315cd5335585f051f33b5515d603b8db73102 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 13:26:27 -0400
Subject: [PATCH 06/32] runtime txt for R

---
 runtime.txt | 1 +
 1 file changed, 1 insertion(+)
 create mode 100644 runtime.txt

diff --git a/runtime.txt b/runtime.txt
new file mode 100644
index 0000000..5e1ec48
--- /dev/null
+++ b/runtime.txt
@@ -0,0 +1 @@
+r-2018-02-05

From 9f7f937bf05d894ed5a47aee07ed48a5bb05e57c Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 13:27:17 -0400
Subject: [PATCH 07/32] added init R file

---
 install.R | 5 +++++
 1 file changed, 5 insertions(+)
 create mode 100644 install.R

diff --git a/install.R b/install.R
new file mode 100644
index 0000000..77bdf26
--- /dev/null
+++ b/install.R
@@ -0,0 +1,5 @@
+install.packages("tidyverse")
+install.packages("rmarkdown")
+install.packages("httr")
+install.packages("shinydashboard")
+install.packages('leaflet')

From f2e59f977b10ababd8a6a700382e55e25eab927d Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 13:29:35 -0400
Subject: [PATCH 08/32] for octave kernel

---
 apt.txt | 5 +++++
 1 file changed, 5 insertions(+)
 create mode 100644 apt.txt

diff --git a/apt.txt b/apt.txt
new file mode 100644
index 0000000..dc0d6cc
--- /dev/null
+++ b/apt.txt
@@ -0,0 +1,5 @@
+octave
+octave-symbolic
+octave-miscellaneous
+gnuplot
+ghostscript

From 8065126e819e0f48039080e48d66a92e3b5554fb Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 13:30:32 -0400
Subject: [PATCH 09/32] move to master

---
 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/README.md b/README.md
index 3ce742d..e6e2a2f 100644
--- a/README.md
+++ b/README.md
@@ -1,6 +1,6 @@
 # Conda environment with environment.yml
 
-[![Binder](http://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/3keepmovingforward3/conda/test)
+[![Binder](http://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/3keepmovingforward3/conda/master)
 
 A Binder-compatible repo with an `environment.yml` file.
 

From 9c4049805ed62db212bace4e00d3b0790d2763f7 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 13:52:50 -0400
Subject: [PATCH 10/32] fixe conda reror

---
 environment.yml | 2 --
 1 file changed, 2 deletions(-)

diff --git a/environment.yml b/environment.yml
index fc5d710..c1df84d 100644
--- a/environment.yml
+++ b/environment.yml
@@ -19,7 +19,6 @@ dependencies:
   - yaml
   - xz
   - xlwt
-  - xlwings
   - wheel
   - tornado
   - sqlite
@@ -27,7 +26,6 @@ dependencies:
   - sip
   - tk
   - isort
-  - ipytkernel
   - ipython
   - html5lib
   - jupyter

From 5e8e00a7146e503d33c233beb4e86329361ee645 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 14:17:07 -0400
Subject: [PATCH 11/32] trying to fix

---
 environment.yml | 7 -------
 1 file changed, 7 deletions(-)

diff --git a/environment.yml b/environment.yml
index c1df84d..88fb0f0 100644
--- a/environment.yml
+++ b/environment.yml
@@ -9,18 +9,12 @@ dependencies:
   - dill
   - pandas
   - partd
-  - bokeh
-  - dask
   - scipy
   - zstd
   - zlib
   - zict
   - zeromq
   - yaml
-  - xz
-  - xlwt
-  - wheel
-  - tornado
   - sqlite
   - sympy
   - sip
@@ -29,6 +23,5 @@ dependencies:
   - ipython
   - html5lib
   - jupyter
-  - libssh2
   - octave_kernel
   - python=3.7

From e9b835da5ee720c52dd87c3bae856bf6bbc68191 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 14:18:22 -0400
Subject: [PATCH 12/32] fdfd

---
 environment.yml | 6 ------
 1 file changed, 6 deletions(-)

diff --git a/environment.yml b/environment.yml
index 88fb0f0..0ab1682 100644
--- a/environment.yml
+++ b/environment.yml
@@ -3,11 +3,8 @@ channels:
   - conda-forge
 dependencies:
   - numpy
-  - psutil
-  - toolz
   - matplotlib
   - dill
-  - pandas
   - partd
   - scipy
   - zstd
@@ -20,8 +17,5 @@ dependencies:
   - sip
   - tk
   - isort
-  - ipython
   - html5lib
   - jupyter
-  - octave_kernel
-  - python=3.7

From 7fe4ce7f95228bd719748efce0b62400b4234be8 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 14:26:17 -0400
Subject: [PATCH 13/32] cleaninup up env

---
 environment.yml | 8 --------
 1 file changed, 8 deletions(-)

diff --git a/environment.yml b/environment.yml
index 0ab1682..fb8070a 100644
--- a/environment.yml
+++ b/environment.yml
@@ -4,18 +4,10 @@ channels:
 dependencies:
   - numpy
   - matplotlib
-  - dill
-  - partd
   - scipy
   - zstd
   - zlib
-  - zict
-  - zeromq
   - yaml
   - sqlite
   - sympy
-  - sip
-  - tk
-  - isort
-  - html5lib
   - jupyter

From db83028c695791417cab80796dfc1e36b70174b6 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 14:28:59 -0400
Subject: [PATCH 14/32] changed to JupyterLab

---
 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/README.md b/README.md
index e6e2a2f..a71bdfd 100644
--- a/README.md
+++ b/README.md
@@ -1,6 +1,6 @@
 # Conda environment with environment.yml
 
-[![Binder](http://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/3keepmovingforward3/conda/master)
+[![Binder](http://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/3keepmovingforward3/conda/master?urlpath=lab)
 
 A Binder-compatible repo with an `environment.yml` file.
 

From ee46e89305e9ed41f68d04a347133bfc81b54562 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 15:50:06 -0400
Subject: [PATCH 15/32] remove r

---
 install.R | 5 -----
 1 file changed, 5 deletions(-)
 delete mode 100644 install.R

diff --git a/install.R b/install.R
deleted file mode 100644
index 77bdf26..0000000
--- a/install.R
+++ /dev/null
@@ -1,5 +0,0 @@
-install.packages("tidyverse")
-install.packages("rmarkdown")
-install.packages("httr")
-install.packages("shinydashboard")
-install.packages('leaflet')

From 735d498ccb580da934b57168713ac1d1045a37c3 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 15:50:15 -0400
Subject: [PATCH 16/32] remove r

---
 runtime.txt | 1 -
 1 file changed, 1 deletion(-)
 delete mode 100644 runtime.txt

diff --git a/runtime.txt b/runtime.txt
deleted file mode 100644
index 5e1ec48..0000000
--- a/runtime.txt
+++ /dev/null
@@ -1 +0,0 @@
-r-2018-02-05

From 61854e8bac025758ffc9c86e7e270e0df5131161 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 15:53:13 -0400
Subject: [PATCH 17/32] wtf

---
 environment.yml | 6 ------
 1 file changed, 6 deletions(-)

diff --git a/environment.yml b/environment.yml
index fb8070a..99b67b7 100644
--- a/environment.yml
+++ b/environment.yml
@@ -5,9 +5,3 @@ dependencies:
   - numpy
   - matplotlib
   - scipy
-  - zstd
-  - zlib
-  - yaml
-  - sqlite
-  - sympy
-  - jupyter

From dca1df40f37f2ebff545494244344b876d2af062 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 15:54:18 -0400
Subject: [PATCH 18/32] Delete apt.txt

---
 apt.txt | 5 -----
 1 file changed, 5 deletions(-)
 delete mode 100644 apt.txt

diff --git a/apt.txt b/apt.txt
deleted file mode 100644
index dc0d6cc..0000000
--- a/apt.txt
+++ /dev/null
@@ -1,5 +0,0 @@
-octave
-octave-symbolic
-octave-miscellaneous
-gnuplot
-ghostscript

From fd59db3b467695aa3a4ce24bc6d6b547c149c07a Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 16:00:57 -0400
Subject: [PATCH 19/32] Update environment.yml

---
 environment.yml | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/environment.yml b/environment.yml
index 99b67b7..9d56def 100644
--- a/environment.yml
+++ b/environment.yml
@@ -5,3 +5,5 @@ dependencies:
   - numpy
   - matplotlib
   - scipy
+  - pandas
+  - octave_kernel

From e1de567d56a38b368b9914e0c1375646491e9d54 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 16:40:17 -0400
Subject: [PATCH 20/32] Update environment.yml

---
 environment.yml | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/environment.yml b/environment.yml
index 9d56def..4c7fad6 100644
--- a/environment.yml
+++ b/environment.yml
@@ -7,3 +7,8 @@ dependencies:
   - scipy
   - pandas
   - octave_kernel
+  - pyjanitor
+  - node
+  - occi
+  - occidentalis
+  

From 76015c42e825fbf6de6dedeb2a35fc6ed710062a Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 16:44:46 -0400
Subject: [PATCH 21/32] Update environment.yml

---
 environment.yml | 3 ---
 1 file changed, 3 deletions(-)

diff --git a/environment.yml b/environment.yml
index 4c7fad6..299d31b 100644
--- a/environment.yml
+++ b/environment.yml
@@ -9,6 +9,3 @@ dependencies:
   - octave_kernel
   - pyjanitor
   - node
-  - occi
-  - occidentalis
-  

From 92fd8dbf05d73ad3d9f34b9be75e84a5fd867d03 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 16:51:02 -0400
Subject: [PATCH 22/32] Update environment.yml

---
 environment.yml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/environment.yml b/environment.yml
index 299d31b..c26e1c6 100644
--- a/environment.yml
+++ b/environment.yml
@@ -8,4 +8,3 @@ dependencies:
   - pandas
   - octave_kernel
   - pyjanitor
-  - node

From abdc5261b060d3bf13b681ccf9b261e88352b1db Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 16:55:09 -0400
Subject: [PATCH 23/32] Create apt.txt

---
 apt.txt | 1 +
 1 file changed, 1 insertion(+)
 create mode 100644 apt.txt

diff --git a/apt.txt b/apt.txt
new file mode 100644
index 0000000..8b13789
--- /dev/null
+++ b/apt.txt
@@ -0,0 +1 @@
+

From 359763c15836d38d674b9b013f5b692fe99432b8 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Thu, 28 Mar 2019 20:16:34 -0400
Subject: [PATCH 24/32] Update environment.yml

---
 environment.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/environment.yml b/environment.yml
index c26e1c6..299d31b 100644
--- a/environment.yml
+++ b/environment.yml
@@ -8,3 +8,4 @@ dependencies:
   - pandas
   - octave_kernel
   - pyjanitor
+  - node

From fce4b0b35c3ebddc181248038d5846ac527716f0 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Fri, 29 Mar 2019 17:20:05 -0400
Subject: [PATCH 25/32] Update environment.yml

---
 environment.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/environment.yml b/environment.yml
index 299d31b..17fba9e 100644
--- a/environment.yml
+++ b/environment.yml
@@ -9,3 +9,4 @@ dependencies:
   - octave_kernel
   - pyjanitor
   - node
+  - bash_kernel

From 45ae07fd39f0bbf931df28b29b2a50b2d201ef61 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Fri, 29 Mar 2019 17:23:38 -0400
Subject: [PATCH 26/32] Update environment.yml

---
 environment.yml | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/environment.yml b/environment.yml
index 17fba9e..3d29ca7 100644
--- a/environment.yml
+++ b/environment.yml
@@ -9,4 +9,5 @@ dependencies:
   - octave_kernel
   - pyjanitor
   - node
-  - bash_kernel
+  - pip:
+    - bash_kernel

From 863b9d431701d71be971f6fe1884e8123ea974b1 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Fri, 29 Mar 2019 17:26:12 -0400
Subject: [PATCH 27/32] Update apt.txt

---
 apt.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/apt.txt b/apt.txt
index 8b13789..5734185 100644
--- a/apt.txt
+++ b/apt.txt
@@ -1 +1 @@
-
+conda update -n base conda

From 902011086a676e56f6911e99e0d0a631685f6be5 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Fri, 29 Mar 2019 17:28:46 -0400
Subject: [PATCH 28/32] Update apt.txt

---
 apt.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/apt.txt b/apt.txt
index 5734185..8b13789 100644
--- a/apt.txt
+++ b/apt.txt
@@ -1 +1 @@
-conda update -n base conda
+

From 508b92938b6489689cd834e0e1ec535a658a7be3 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Fri, 29 Mar 2019 17:31:55 -0400
Subject: [PATCH 29/32] Update environment.yml

---
 environment.yml | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/environment.yml b/environment.yml
index 3d29ca7..a65155a 100644
--- a/environment.yml
+++ b/environment.yml
@@ -9,5 +9,8 @@ dependencies:
   - octave_kernel
   - pyjanitor
   - node
+  - boto
+  - django
+  - requests
   - pip:
     - bash_kernel

From 66d5980684f35eba403dac4766ab30684e83a96e Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Fri, 29 Mar 2019 17:32:05 -0400
Subject: [PATCH 30/32] Update apt.txt

---
 apt.txt | 8 +++++++-
 1 file changed, 7 insertions(+), 1 deletion(-)

diff --git a/apt.txt b/apt.txt
index 8b13789..64aabeb 100644
--- a/apt.txt
+++ b/apt.txt
@@ -1 +1,7 @@
-
+texlive-latex-base
+texlive-latex-recommended
+texlive-science
+texlive-latex-extra
+texlive-fonts-recommended
+dvipng
+ghostscript

From eb29cdc39232bbd0fc861e5cd34109f5ba9a00b3 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Fri, 29 Mar 2019 17:32:52 -0400
Subject: [PATCH 31/32] Update environment.yml

---
 environment.yml | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/environment.yml b/environment.yml
index a65155a..09dceff 100644
--- a/environment.yml
+++ b/environment.yml
@@ -12,5 +12,8 @@ dependencies:
   - boto
   - django
   - requests
+  - nodejs=9
+  - jupyterlab>=0.33
   - pip:
     - bash_kernel
+    - jupyterlab_latex

From f9b5974aff5b28309ea6ad8c9968c5e28d080954 Mon Sep 17 00:00:00 2001
From: Benjamin Blouin <3keepmovingforward3@users.noreply.github.com>
Date: Fri, 29 Mar 2019 17:33:24 -0400
Subject: [PATCH 32/32] Create postBuild

---
 postBuild | 9 +++++++++
 1 file changed, 9 insertions(+)
 create mode 100644 postBuild

diff --git a/postBuild b/postBuild
new file mode 100644
index 0000000..00477e1
--- /dev/null
+++ b/postBuild
@@ -0,0 +1,9 @@
+#!/bin/bash
+
+# run matplotlib once to generate the font cache
+python -c "import matplotlib as mpl; mpl.use('Agg'); import pylab as plt; fig, ax = plt.subplots(); fig.savefig('test.png')"
+	
+test -e test.png && rm test.png
+
+jupyter labextension install @jupyterlab/latex
+jupyter lab build